A single line often inverts meaning once you see what it
answers, so neighbouring messages are always shown.
-
Sorry, you mean in the RmYN02 reads? I seem to remember Weifeng discussing that before. Might even be noted in the paper. Can't remember. RmYN02 is pooled from a number of bats - 11 or 13, I can't quite recall.
-
Yeah, RmYN02 - the more complete of the two genomes. Definitely another genome in there
-
It's another bat CoV closely related (but not identical) to others previously sequenced. Every yellow bar is an intrahost variant >10% (SNPs are all linked as far as I can tell, so I think it's just one additional genome) [shared file(s): Screen Shot 2020-09-18 at 16.19.28.png]
-
Yes, I agree. I'll check back what we did - if anything - about this. It would be really interesting to see a phylogeny with that, RmYN02 and RmYN01 included.
-
2020-09-18 16:37
Kristian G. Andersen
I'm just going to pull that minority genome out - I'll keep you posted... Yeah, this is very interesting
-
Great!
-
Here's what I have assembled so far - all look great. Only need to assemble one of the remaining pangolin CoVs, which has a huge dataset. RBD in green. Conclusion? Nothing to see here.... as expected. [shared file(s): MP789.jpg, P1E.jpg, P2S.jpg, P2V.jpg, P3B.jpg,P4L.jpg, P5E.jpg, P5L.jpg, RaTG13.jpg, RmYN02.jpg]
-
Great work! So annoying that these people are accusing of fabrication when they are honest scientists working hard. Makes by blood boil.
-
Here's the minor genome - probably not a complete genome, but definitely present. [shared file(s): minor_variant_genome.fa]