A single line often inverts meaning once you see what it
answers, so neighbouring messages are always shown.
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Any thought if it would likely be an immunecompromised patient - could a weak immune response enhance selection for escape? Or do we know of any asymptomatic shedders - which would allow for the transmission if the person was out and about?
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@Robert Garry It's the insertion P in PRRA
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@Robert Garry Would be surprising if it didn't affect cleavage...
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It's a little weird in that respect - the patient above essentially has no - or very limited - humoral immunity, but thesignatures still look like immune escape - or maybe something else is going on. So yes, even immunecompromisedpatients can shed viruses that may have signatures of immune escape.
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2020-12-14 10:14
Andrew Rambaut
@Robert Garry Ooh. Missed that.
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@Robert Garry That's the one I'd be concerned about.
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@Robert Garry Oh, interesting. It's rare - but parallel evolution? [shared file(s): Screen Shot 2020-12-14 at 10.16.54.png]
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@Robert Garry P > H still have FCS, but affects glycans and likely regulation?
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Can you send a link to that nextstrain view?