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Slack / Private Message Drop, p.251 [SLACK_000465] · slack_pm:msg:02611

Page text: p.251 · original PDF

Date
2020-11-05 14:14
Type
chat message · slack
recipient
Robert F. Garry, Edward C. Holmes, Andrew Rambaut
speaker
Kristian G. Andersen

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For this mink stuff - I could totally see selection in mink driving things like immune escape. Presumably selection for transmission (including longer infectious period) is high given that they're caged up.

In context

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  1. 2020-11-05 14:03 Kristian G. Andersen open
    What else did I miss? Mink? Anything public on the specific mutations? I can see some of these have already been found in human cases, so unclear to me how we know they originated in mink?
  2. 2020-11-05 14:05 Andrew Rambaut open
    Y453F seems to have arisen 5 or 6 times in humans. But it arose 4 times independently in Marion's mink genomes and now in Denmark. Seems possible it is an adaptation to mink's ACE2 but also can occur in humans but not reallygo anywhere.
  3. 2020-11-05 14:11 Andrew Rambaut open
    The variant that the Danes are going on their crazed furry creature killing spree about has 4 spike mutations - 69del,Y453F, I692V, M1229I
  4. 2020-11-05 14:13 Kristian G. Andersen open
    Thanks Andrew - yeah, I noticed Y453F was found in NL as well. Is it public knowledge that these are the four mutations, or is that WHO confidential for now? I have a TON of DK reporters asking about this, but haven't found anything official.
  5. 2020-11-05 14:14 Kristian G. Andersen
    For this mink stuff - I could totally see selection in mink driving things like immune escape. Presumably selection for transmission (including longer infectious period) is high given that they're caged up.
  6. 2020-11-05 14:15 Andrew Rambaut open
    Confidential but everyone is going bonkers at Denmark for not giving out any details.
  7. 2020-11-05 14:16 Kristian G. Andersen open
    So ridiculous - they have been sitting on a ton of mink+human sequencing data for months and nothing released. I'll call them out to a couple of journalists
  8. 2020-11-05 14:19 Andrew Rambaut open
    They just dumped a whole lot of human data on GISAID but it is all from Apr/May not sure why they did that

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