COVID-19 Records

Private channel session 539

9 messages over 16m, 2020-11-05 – 2020-11-05.

A “conversation” here is an activity session — a run of messages with under 60 minutes of silence inside it. The channel had no native conversation boundaries.

  1. 2020-11-05 14:02 Kristian G. Andersen open PDF p.250
    Not jealous :point_up_2: [shared file(s): kga.jpg]
  2. 2020-11-05 14:03 Kristian G. Andersen open PDF p.250
    What else did I miss? Mink? Anything public on the specific mutations? I can see some of these have already been found in human cases, so unclear to me how we know they originated in mink?
  3. 2020-11-05 14:05 Andrew Rambaut open PDF p.251
    Y453F seems to have arisen 5 or 6 times in humans. But it arose 4 times independently in Marion's mink genomes and now in Denmark. Seems possible it is an adaptation to mink's ACE2 but also can occur in humans but not reallygo anywhere.
  4. 2020-11-05 14:11 Andrew Rambaut open PDF p.251
    The variant that the Danes are going on their crazed furry creature killing spree about has 4 spike mutations - 69del,Y453F, I692V, M1229I
  5. 2020-11-05 14:13 Kristian G. Andersen open PDF p.251
    Thanks Andrew - yeah, I noticed Y453F was found in NL as well. Is it public knowledge that these are the four mutations, or is that WHO confidential for now? I have a TON of DK reporters asking about this, but haven't found anything official.
  6. 2020-11-05 14:14 Kristian G. Andersen open PDF p.251
    For this mink stuff - I could totally see selection in mink driving things like immune escape. Presumably selection for transmission (including longer infectious period) is high given that they're caged up.
  7. 2020-11-05 14:15 Andrew Rambaut open PDF p.251
    Confidential but everyone is going bonkers at Denmark for not giving out any details.
  8. 2020-11-05 14:16 Kristian G. Andersen open PDF p.251
    So ridiculous - they have been sitting on a ton of mink+human sequencing data for months and nothing released. I'll call them out to a couple of journalists
  9. 2020-11-05 14:19 Andrew Rambaut open PDF p.251
    They just dumped a whole lot of human data on GISAID but it is all from Apr/May not sure why they did that