COVID-19 Records

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Slack / Private Message Drop, p.751 [SLACK_000965] · slack_pm:msg:07865

Page text: p.751 · original PDF

Date
2021-05-05 10:37
Type
chat message · slack
recipient
Kristian G. Andersen, Robert F. Garry, Edward C. Holmes
speaker
Andrew Rambaut

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I couldn't face it. I would just get annoyed

In context

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  1. 2021-05-05 10:25 Robert F. Garry open
    May be better to just revert to using your HP-87. Probably good to go for another 30-40 years at least.
  2. 2021-05-05 10:27 Robert F. Garry open
    https://academic.oup.com/mbe/advance-article/doi/10.1093/molbev/msab118/6257226 "We have made available the proCoV2 genome sequence in FastA format at http://igem.temple.edu/COVIDn19, which is the same as the NCBI reference genome with base differences corresponding to 1 - 3 mutations at positions 18060, 8782, and 28144, as discussed in the main text. In this mutation graph, COI for each variant is shown next to the arrow.
  3. 2021-05-05 10:27 Robert F. Garry open
    Lineage A?
  4. 2021-05-05 10:33 Kristian G. Andersen open
    No, B. I'm perplexed by that paper - didn't read it in detail, but I don't think they can really do what they do. So many reversions observed during the pandemic and associated dates and biases in sequencing early on likely majorlybias interpretation. @Andrew Rambaut, did you get a chance to read it?
  5. 2021-05-05 10:37 Andrew Rambaut
    I couldn't face it. I would just get annoyed
  6. 2021-05-05 10:42 Kristian G. Andersen open
    Agreed. It's a very interesting question, but exceptionally hard to answer - working on some very early attempts with Joel + Marc.

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