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Slack / Private Message Drop, p.609 [SLACK_000823] · slack_pm:msg:06370

Page text: p.609 · original PDF

Date
2021-03-20 09:36
Type
chat message · slack
recipient
Kristian G. Andersen, Robert F. Garry, Edward C. Holmes
speaker
Andrew Rambaut

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OK - baseline cross-reactivity with some sort of CoV

In context

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  1. 2021-03-20 09:34 Kristian G. Andersen open
    3% - that may well be every ~6 months given (a) exposures likely very low titer, and (b) seroreversion to CoVs. Ithink it's safe to say that a huge number of people are exposed to CoVs on a daily basis - and not just in China.
  2. 2021-03-20 09:34 Andrew Rambaut open
    ~5% serology seems to be the baseline false positive for just about everything - see Ebola in Sierra Leone etc.
  3. 2021-03-20 09:35 Kristian G. Andersen open
    ... in Africa :wink:. That 2-3% number actually has pretty good baselines
  4. 2021-03-20 09:36 Kristian G. Andersen open
    Baseline sampled in e.g., Wuhan - of all places.
  5. 2021-03-20 09:36 Andrew Rambaut
    OK - baseline cross-reactivity with some sort of CoV
  6. 2021-03-20 09:36 Andrew Rambaut open
    See waste-water in Europe in 2019
  7. 2021-03-20 09:40 Kristian G. Andersen open
    The 2-3% serological studies were specifically for SARS-like CoVs, with good baselines - so they might well be accurate. But yeah, getting a positive hit on a CoV serological assay - without controlling very closely for background- you can get anything, anywhere.
  8. 2021-03-20 09:42 Kristian G. Andersen open
    Andrew - since you have a keen eye. Do you know which 'mystery' sequences and viruses Jesse is talking about? I'm quite confused. I think maybe he means these? https://twitter.com/K_G_Andersen/status/1373310963680571397?s=20 Clearly they must be fragments they have managed to successfully sequence, as they mention in the Nature addendum - so absolutely no mystery. Am I missing something?
  9. 2021-03-20 09:43 Andrew Rambaut open
    I was assuming it was those. Some RdRp PCR products I assume

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