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Slack / Private Message Drop, pp.468-469 [SLACK_000682] · slack_pm:msg:04867

Page text: p.468, p.469 · original PDF

Date
2021-01-31 15:27
Type
chat message · slack
recipient
Kristian G. Andersen, Robert F. Garry, Edward C. Holmes
speaker
Andrew Rambaut

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shared file(s): image.png

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  1. 2021-01-31 15:16 Kristian G. Andersen open
    Sorry Bob...
  2. 2021-01-31 15:17 Robert F. Garry open
    It what I got when I did the alignment myself which is why it shows up in our virological post that way. Somehow Ithought I got it wrong.
  3. 2021-01-31 15:18 Kristian G. Andersen open
    Trust yourself man! :wink:
  4. 2021-01-31 15:27 Andrew Rambaut open
    The problem is it is ambiguous where the deletion is:
  5. 2021-01-31 15:27 Andrew Rambaut
    shared file(s): image.png
  6. 2021-01-31 15:29 Andrew Rambaut open
    Actually in nucleotides it could be one base further towards 3'
  7. 2021-01-31 15:30 Andrew Rambaut open
    Definitely deletes 2 Ls and an A but could be LLA or LAL.
  8. 2021-01-31 15:32 Robert F. Garry open
    Oh my...can we look at the del in the Tulane patient as a tie-breaker?
  9. 2021-01-31 15:34 Kristian G. Andersen open
    I extracted the ORF and aligned in AA space - all come out with LLA deleted.

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