Slack / Private Message Drop — page 469

[Andrew Rambaut] shared file(s): image.png [2021-01-31 15:29:39] [Andrew Rambaut] Actually in nucleotides it could be one base further towards 3' [2021-01-31 15:30:50] [Andrew Rambaut] Definitely deletes 2 Ls and an A but could be LLA or LAL. [2021-01-31 15:32:48] [Robert Garry] Oh my...can we look at the del in the Tulane patient as a tie-breaker? [2021-01-31 15:34:11] [Kristian Andersen] I extracted the ORF and aligned in AA space - all come out with LLA deleted. [2021-01-31 15:36:10] [Andrew Rambaut] But you could delete LAL and get the same amino acid sequence [2021-01-31 15:36:38] [Robert Garry] The whole region is subject to various deletions in some other immune compromised patients. [2021-01-31 15:37:27] [Kristian Andersen] I'll just accept I don't understand sequences... :wink: [2021-01-31 15:37:53] [Andrew Rambaut] Always look at the nucleotide sequences, man. [2021-01-31 15:38:49] [Andrew Rambaut] An interesting repeat here CTTTA CTTG CTTTA - don't know if it means anything [2021-01-31 15:38:51] [Kristian Andersen] NEVER [2021-01-31 15:39:05] [Andrew Rambaut] Just looks nice [2021-01-31 15:39:08] [Kristian Andersen] Recombination. I'm telling you [2021-01-31 15:39:48] [Kristian Andersen] We should volley it over to Billy - I'm sure he'd figure this one out for us.