Chat message

Slack / Private Message Drop, p.302 [SLACK_000516] · slack_pm:msg:03162

Date: 2020-12-06 13:16
Type: chat message · slack
recipient: Robert F. Garry, Edward C. Holmes, Andrew Rambaut
speaker: Kristian G. Andersen

Recipients on this medium are inferred from channel membership, not per-message addressing.

Some cleaner alignments here with better naming, etc. [shared file(s): 2020.12.06_SARS-CoV-2_RaTG13.geneious, 2020.12.06_SARS2_SARS_SARS-like.geneious]

In context

A single line often inverts meaning once you see what it answers, so neighbouring messages are always shown.

2020-12-06 12:39 Andrew Rambaut open

Given we see identical genomes spaced 6 weeks apart, I don't think we need to use imputed dates - just enforce WA1 to be an outgroup
2020-12-06 12:40 Andrew Rambaut open

By the way - the C16T in WH04 is probably wrong, it is the very first nucleotide of that sequence. Should find abetter canonical lineage A
2020-12-06 12:44 Kristian G. Andersen open

Ah, yes - could be wrong. Let me see if I can pull the raw data
2020-12-06 12:52 Andrew Rambaut open

I will find a better one - it isn't full length.
2020-12-06 13:16 Kristian G. Andersen

Some cleaner alignments here with better naming, etc. [shared file(s): 2020.12.06_SARS-CoV-2_RaTG13.geneious, 2020.12.06_SARS2_SARS_SARS-like.geneious]

Full conversation →