COVID-19 Records

Chat message

Slack / Private Message Drop, p.652 [SLACK_000866] · slack_pm:msg:06827

Page text: p.652 · original PDF

Date
2021-03-29 15:33
Type
chat message · slack
recipient
Robert F. Garry, Edward C. Holmes, Andrew Rambaut
speaker
Kristian G. Andersen

Recipients on this medium are inferred from channel membership, not per-message addressing.

@Kristian Andersen Oh, yeah, that does look very "Egypty". https://outbreak.info/situation-reports?pango=C.36

Links shared

In context

A single line often inverts meaning once you see what it answers, so neighbouring messages are always shown.

  1. 2021-03-29 15:31 Andrew Rambaut open
    @Kristian Andersen (but it may be a sublineage of this which would make it C.36.1)
  2. 2021-03-29 15:31 Andrew Rambaut open
    @Kristian Andersen shared file(s): C.36.ml.tree.pdf
  3. 2021-03-29 15:32 Andrew Rambaut open
    @Kristian Andersen Need to work out where on this tree the VOCy mutations arise
  4. 2021-03-29 15:32 Andrew Rambaut open
    @Kristian Andersen But very 'Egypty' over all
  5. 2021-03-29 15:33 Kristian G. Andersen
    @Kristian Andersen Oh, yeah, that does look very "Egypty". https://outbreak.info/situation-reports?pango=C.36
  6. 2021-03-29 15:34 Kristian G. Andersen open
    @Kristian Andersen .1 appears to be Canada? https://outbreak.info/situation-reports?pango=C.36.1&loc=USA &loc=USA_US-CA&selected=Worldwide
  7. 2021-03-29 15:41 Andrew Rambaut open
    @Kristian Andersen The blue clade has Spike L452R, Spike Q677H, Spike S12F and the green clade has some extras plus the 69/70 deletion [shared file(s): image.png]
  8. 2021-03-29 15:48 Kristian G. Andersen open
    @Kristian Andersen Ah, okay - so not all _that_ mutationally 'saturated'. That's a pretty big clade though - and Ididn't quite realize how many mutations pop up in ORF1ab, although that's of course a very big gene.
  9. 2021-03-29 15:49 Edward C. Holmes open
    Just chatting to Dominic now.

Full conversation →