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Slack / Private Message Drop, p.640 [SLACK_000854] · slack_pm:msg:06707

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Is there a WIV used lab animal stall?

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2021-03-26 14:22 Kristian G. Andersen open

So for the cage they have no PCR results, but they have sequencing results? I don't quite understand what the yellow/red cells with percentages mean.
2021-03-26 14:28 Robert F. Garry open

True - that's strange- they must have tried to sequence everything and gotten some sequences from pcr negative samples. Q61 is the same- pcr negative ngs positive - I think we've seen this on occasion in some of the Lassa samples.
2021-03-26 14:29 Robert F. Garry open

Here: https://pubmed.ncbi.nlm.nih.gov/32457420/
2021-03-26 14:30 Kristian G. Andersen open

Nah - gotta have PCR results to get any sequencing results with this virus
2021-03-26 14:30 Edward C. Holmes

Is there a WIV used lab animal stall?
2021-03-26 14:30 Kristian G. Andersen open

For Lassa it's down to divergence - not so for this virus
2021-03-26 14:31 Edward C. Holmes open

Let's wait for the report - doubtless will be dealt with in detail
2021-03-26 14:32 Edward C. Holmes open

https://www.washingtonpost.com/local/md-politics/redfield-hogan-wuhan-coronavirus/2021/03/26/0d93dabe-8e63-1 1eb-a6bd-0eb91c03305a_story.html
2021-03-26 14:32 Robert F. Garry open

Good point! Diversity yeah - the PCRS for lASV only 70-75% sensitive vs NGS.