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Slack / Private Message Drop, p.332 [SLACK_000546] · slack_pm:msg:03496

Page text: p.332 · original PDF

Date
2020-12-21 11:15
Type
chat message · slack
recipient
Robert F. Garry, Edward C. Holmes, Andrew Rambaut
speaker
Kristian G. Andersen
Topics
Natural origin / zoonotic spillover

Recipients on this medium are inferred from channel membership, not per-message addressing.

I can't quite figure out if pangolin actually assigned it to that lineage - the question was asked earlier, but no reply yet

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I can't quite figure out if pangolin actually assigned it to that lineage - the question was asked earlier, but no reply yet own voice, substantive speaker_own asserts

In context

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  1. 2020-12-21 10:03 Kristian G. Andersen open
    @Andrew Rambaut - thanks for taking down the post from Nigeria. I flagged it immediately this morning too with the team, so they need to get this updated and correct - Paul is working on it.
  2. 2020-12-21 10:57 Andrew Rambaut open
    I made it a private message.
  3. 2020-12-21 11:05 Kristian G. Andersen open
    He's working on a new version - need to get the basics right...
  4. 2020-12-21 11:08 Andrew Rambaut open
    Do you know if pangolin assigned it B.1.1.7 or if it was just the presence the mutation that suggested it to them? Weare putting a special bit for pangolin to require 3 of the mutations and no wildtype at these sites to make sure there are no mis-classifcations. To risky otherwise.
  5. 2020-12-21 11:15 Kristian G. Andersen
    I can't quite figure out if pangolin actually assigned it to that lineage - the question was asked earlier, but no reply yet
  6. 2020-12-21 11:21 Andrew Rambaut open
    It didn't - or rather the latest version doesn't.
  7. 2020-12-21 11:25 Kristian G. Andersen open
    OK, thought so. Not really sure what he did...

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