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Slack / Private Message Drop, p.567 [SLACK_000781] · slack_pm:msg:05918

Page text: p.567 · original PDF

Date
2021-03-04 21:03
Type
chat message · slack
recipient
Kristian G. Andersen, Robert F. Garry, Andrew Rambaut
speaker
Edward C. Holmes
Topics
Furin cleavage site and molecular features

Recipients on this medium are inferred from channel membership, not per-message addressing.

L455F. This is what the person collating the sequences told me: "I just had a quick peek at the Aussie mutation dataI have and dug out the samples that have the L455F mutation. There are 16 in total, all from Victoria, collected onthe following dates: 2020-08-18, 2020-08-20, 2020-08-27, 2020-08-28, 2020-08-29, 2020-08-30, 2020-08-31,2020-09-05, 2020-09-10, 2020-09-11, 2020-09-15. All belong to the D.2 lineage. I've attached a .csv file just in case you wanted to look further at the full suite of mutations in these samples. The mutation column has the mutation summary in the form of Gene:RefAA:Position:AltAA:nonsynonymous, e.g.S:L:455:F:n." [shared file(s): L455F_samples.csv]

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  1. 2021-03-04 21:03 Edward C. Holmes
    L455F. This is what the person collating the sequences told me: "I just had a quick peek at the Aussie mutation dataI have and dug out the samples that have the L455F mutation. There are 16 in total, all from Victoria, collected onthe following dates: 2020-08-18, 2020-08-20, 2020-08-27, 2020-08-28, 2020-08-29, 2020-08-30, 2020-08-31,2020-09-05, 2020-09-10, 2020-09-11, 2020-09-15. All belong to the D.2 lineage. I've attached a .csv file just in case you wanted to look further at the full suite of mutations in these samples. The mutation column has the mutation summary in the form of Gene:RefAA:Position:AltAA:nonsynonymous, e.g.S:L:455:F:n." [shared file(s): L455F_samples.csv]
  2. 2021-03-04 21:07 Kristian G. Andersen open
    Thanks Eddie - appreciate it. I'll have a look in the morning - pretty interesting mutation this one.

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