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Gates Package, p.819 · gates:exh:00259
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both the HBG1 and the HBG2 promoter. There is also accumulating evidence that DSBs catalyzed by
CRISPR/Cas9 can result in large genomic deletions, chromosomal rearrangements, as well as p53induced cell cycle arrest and apoptosis (23-25). To address these problems, we focused our work on base
editors, enzymes that are capable of introducing precise cytidine or adenine substitutions with minimal
occurrence of DSBs and indels at the target site (26-29). Here we employed an advanced adenine base
editor version (ABE8e). ABE8e contains additional mutations that increase on-target activity and greatly
decrease off-target activity (30).
We targeted ABE8e to the BCL11A binding site in the HBG1/2 promoters (Fig.1A) to mediate a A>G
conversion at the -113 position. The corresponding sgRNA was selected in an earlier study from a series
of sgRNAs targeting the BCL11A binding motif as the most efficient in -globin reactivation (12). It is
thought that the -113 A>G mutation does not disrupt BCL11A binding, but rather creates a de novo binding
site for the transcriptional activator GATA1 ((T/A)GATA(A/G)) that outcompetes binding of the BCL11A
(31). However, as a result of the relatively wide editing window of ABE8e, in addition to the -113A>G
conversion, bystander editing at neighboring adenines is expected. (Fig.1A, right panel). Specifically, the -
116A>G conversion would destroy the BCL11A binding motif.
Here, we evaluated a new HDAd-EF1.ABE8e vector in vitro in CD34+ cells from -thalassemia and SCD
patients as well as in ex vivo and in vivo HSC gene therapy setting in the -YAC mouse model. In this
context, we tested a new regimen of base editing that does not require the integration of the mgmtP140K
cassette for in vivo selection.
Results